Network datasets for perturbation reconstruction
A set of networks for studying the reconstruction of perturbation propagation paths.
The giant components of the networks studied are provided as the following edge list files:
airports_giant.net : AIRPORT NETWORK ecoli_giant.net : E COLI NETWORK email_giant.net : EMAIL NETWORK internet_giant.net : INTERNET NETWORK Hsapiens.net : H SAPIENS METABOLIC NETWORK
The format of the edge list files is:
n1 n2 n1 n3
where n1, n2 are node names.
Additionally, for the H sapiens case, we provide the experimentally observed nodes in the file
as a the 2-columns format
where the first column reports the node name, and the second the observed state of such node (1 if perturbed, 0 if unperturbed)